> For the complete documentation index, see [llms.txt](https://help.bioinsight.illumina.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.bioinsight.illumina.com/connected-insights/interpret-and-report/inter-variant-grid/avf-introduction/avf-flags-filter.md).

# Flags Filter

## Flags

Filters variants by the custom flags assigned to a variant defined in Test Components. For more information, refer to [Configuration](/connected-insights/configure/configuration.md).

## Artifact

Filters variants marked as an artifact. When a variant is marked as an artifact, any matching variants identified in future cases ingested with the same test definition will also be marked as an artifact. A match is considered when:

* For a small variant, the chromosome, position, reference allele, and alternate allele match.
* For an copy number variant, structural variant, or RNA splice variant of the same type, the reciprocal overlap exceeds 95%.
* For a translocation structural variant or RNA fusion variant, the involved genes match, if the impacted gene fusion is unidirectional then the matching variant must also be unidirectional, and the sqrt mean squared distance between the breakpoints must be less than 1700 bp.


---

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